Daniel Winston Bellott

Supplementary Information for:

Avian W and mammalian Y chromosomes convergently retained dosage-sensitive regulators

Daniel W Bellott, Helen Skaletsky, Ting-Jan Cho, Laura Brown, Devin Locke, Nancy Chen, Svetlana Galkina, Tatyana Pyntikova, Natalia Koutseva, Tina Graves, Colin Kremitzki, Wesley C Warren, Andrew G Clark, Elena Gaginskaya, Richard K Wilson, David C Page

Nature Genetics 49, 387-394 (2017)

Figures:

Supplementary Figure 1: (PDF) (Figure legend)

Dot plots of the pseudoautosomal region and HINTW region

Supplementary Figure 2: (PDF) (Figure legend)

Fluorescence and phase contrast images of lampbrush W chromosome spreads

Supplementary Figure 3: (PDF) (Figure legend)

Ancestrally broad expression of Z-W pairs

Tables:

Supplementary Table 1: (XLS)

Tiling path accession and coordinates

Supplementary Table 2: (XLS)

Ancestral Z genes and associated statistics

Supplementary Table 3: (XLS)

Ancestral Z-W pairs from all 14 species

Supplementary Table 4: (XLS)

GO term enrichment

Data:

Supplementary Data 1: (TXT)

Sequence assembly of chicken W chromosome

Supplementary Data 2: (TXT)

Assembled W gene sequences

Supplementary Data 3: (TXT)

W gene alignments

Supplementary Data 4: (TXT)

Radiation hybrid map data

Sequences:

Gga Chr W: (FASTA)

Sequence assembly of the chicken W chromosome (identical to Supplementary Data 1)

Gga Chr W: (AGP)

AGP for sequence assembly of the chicken W chromosome